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Document No. 031481-12 AAA-Direct, Dionex Amino Analyzer and AminoPac PA10 Page 52 of 66
10.4.4Incorrect or Variable Retention Times
A. Check your eluent preparation procedure for possible errors.
B. Prime the pump if necessary.
C. Measure the flow rate by weighing out the eluent collected during exactly five minutes. Recalibrate the pump if
necessary.
D. Your sodium hydroxide eluent contains too much carbonate and/or the re-equilibration period at the end of the gradient
method is too short.
E. Set the eluent composition for 100% for each eluent and draw out at least 40 mL of eluent from each eluent line.
F. Samples containing high salt content (> 50 mM) will decrease the retention times.
G. Check and/or service the pump’s proportioning valve. With the pumping turned off, the flow through the pump outlet
tubing (disconnected from the injector) should be zero in all three eluent positions. Check this separately for each
eluent line at the 100% setting.
10.4.5 Unidentified Peaks Appear Alongside the Expected Analyte Peaks
During the acetate gradient a number of small peaks may appear (See Figure 2). These peaks are usually due to trace contaminants
in the water supply. The contaminants accumulate on the column during the isocratic section of the chromatogram and are
released, frequently as irregular baseline deformations or sharp spikes, with the increasing eluent strength.
Some trace contaminants can co-elute with glutamate and aspartate compromising accuracy of quantitation of these amino acids
at lower concentrations. If extraneous peaks are observed even after the water supply is excluded as a possible cause, clean the
autosampler lines and sample loop. The autosampler should be cleaned using the following protocol:
A. Disconnect column and detector cell from the autosampler.
B. Set the pump to 100% deionized water.
C. Place the following solutions in the autosampler in autosampler vials and inject in sequence. Use 25 µL full loop
injections:
1. 1 M NaOH
2. Deionized water
3. IPA
4. Deionized water
5. 1 M HCl
6. Deionized water
10.5 Sodium Hydroxide Cleanup
The sodium hydroxide (2 M) rinse used to decrease column or system-related elevated background is essentially identical with
the rinse performed during an installation of a new system, Section 6.1.3. Following the rinse, check the background again while
pumping the 60 mM sodium hydroxide and repeat the rinse at least once if necessary. Leave the old gold working electrode in
place during the first and the second checking of the detection background. Use a new or reconditioned electrode only if the
background remains high even after the second rinse. Should the new electrode also produce a reading of > 80 nC, remove it from
the system within 30 minutes, rinse it with water and reinstall the old electrode. In case the repeated rinse does not lower the
background, perform the nitric acid cleanup described in Section 10.6. Then try the background with old electrode first and if
necessary only briefly with the new electrode again. In case the new electrode delivers < 80 nC, leave it in the system and recondition
the old electrode using chemical cleanup described in Section 10.8.2.
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